TxtID, m0_71078864: MEGA7, ##linuxproteinorthomuscleproteinorthohttp://www.bioinf.uni-leipzig.de/Software/proteinortho/musclehttp://www.drive5.com/muscle/, "_work -e=1e-5 -cov=50 -identity=50 -clean ", " ; cat ./*.faa >> whole_protein ; mv whole_protein .. ; cd ..", "for file in ./*.faa; do muscle -in $file -out $file.fas; done", "rm -rf *.faa *.fas work_ortho whole_protein", ###########################################################, "usage: python3 protein_ortho.py
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